IRIC - Institute for Research in Immunology and Cancer

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225 results


Publications — IRIC May 1, 2022

The timing of Start is determined primarily by increased synthesis of the Cln3 activator rather than dilution of the Whi5 inhibitor.

Litsios A, Goswami P, Terpstra HM, Coffin C, Vuillemenot LA, Rovetta M, Ghazal G, Guerra P, Buczak K, Schmidt A, Tollis S, Tyers M, Royer CA, Milias-Argeitis A, Heinemann M
Mol Biol Cell 2022-05-01 ;33( 5 ):rp2.


Publications — IRIC March 18, 2022

Chemical Interrogation of Nuclear Size Identifies Compounds with Cancer Cell Line-Specific Effects on Migration and Invasion.

Tollis S, Rizzotto A, Pham NT, Koivukoski S, Sivakumar A, Shave S, Wildenhain J, Zuleger N, Keys JT, Culley J, Zheng Y, Lammerding J, Carragher NO, Brunton VG, Latonen L, Auer M, Tyers M, Schirmer EC
ACS Chem Biol 2022-03-18 ;17( 3 ):680-700.


Publications — IRIC March 1, 2022

The microprotein Nrs1 rewires the G1/S transcriptional machinery during nitrogen limitation in budding yeast.

Tollis S, Singh J, Palou R, Thattikota Y, Ghazal G, Coulombe-Huntington J, Tang X, Moore S, Blake D, Bonneil E, Royer CA, Thibault P, Tyers M
PLoS Biol 2022-03-01 ;20( 3 ):e3001548.


Publications — IRIC January 25, 2022

Vesicular trafficking is a key determinant of the statin response in acute myeloid leukemia.

Krosl J, Bordeleau ME, Moison C, MacRae T, Boivin I, Mayotte N, Gracias D, Baccelli I, Lavallée VP, Bisaillon R, Lehnertz B, Mendoza-Sanchez R, Ruel R, Bertomeu T, Coulombe-Huntington J, Boucher G, Noronha N, Pabst C, Tyers M, Gendron P, Lemieux S, Barabé F, Marinier A, Hébert J, Sauvageau G
Blood Adv 2022-01-25 ;6( 2 ):509-514.


Publications — IRIC October 29, 2021

Identification and optimization of molecular glue compounds that inhibit a noncovalent E2 enzyme-ubiquitin complex.

St-Cyr D, Ceccarelli DF, Orlicky S, van der Sloot AM, Tang X, Kelso S, Moore S, James C, Posternak G, Coulombe-Huntington J, Bertomeu T, Marinier A, Sicheri F, Tyers M
Sci Adv 2021-10-29 ;7( 44 ):eabi5797.


Publications — IRIC October 16, 2021

Chemical Genetics Screen Identifies COPB2 Tool Compounds That Alters ER Stress Response and Induces RTK Dysregulation in Lung Cancer Cells.

Saraon P, Snider J, Schormann W, Rai A, Radulovich N, Sánchez-Osuna M, Coulombe-Huntington J, Huard C, Mohammed M, Lima-Fernandes E, Thériault B, Halabelian L, Chan M, Joshi D, Drecun L, Yao Z, Pathmanathan S, Wong V, Lyakisheva A, Aboualizadeh F, Niu L, Li F, Kiyota T, Subramanian R, Joseph B, Aman A, Prakesch M, Isaac M, Mamai A, Poda G, Vedadi M, Marcellus R, Uehling D, Leighl N, Sacher A, Samaržija M, Jakopović M, Arrowsmith C, Tyers M, Tsao MS, Andrews D, Al-Awar R, Stagljar I
J Mol Biol 2021-10-16 ;433( 23 ):167294.


Publications — IRIC June 1, 2021

A novel class of inhibitors that target SRSF10 and promote p53-mediated cytotoxicity on human colorectal cancer cells.

Sohail M, Shkreta L, Toutant J, Rabea S, Babeu JP, Huard C, Coulombe-Huntington J, Delannoy A, Placet M, Geha S, Gendron FP, Boudreau F, Tyers M, Grierson DS, Chabot B
NAR Cancer 2021-06-01 ;3( 2 ):zcab019.


Publications — IRIC March 4, 2021

A novel p53 regulator, C16ORF72/TAPR1, buffers against telomerase inhibition.

Benslimane Y, Sánchez-Osuna M, Coulombe-Huntington J, Bertomeu T, Henry D, Huard C, Bonneil E, Thibault P, Tyers M, Harrington L
Aging Cell 2021-03-04 ;e13331.


Publications — IRIC February 12, 2021

PRMT5 inhibition disrupts splicing and stemness in glioblastoma.

Sachamitr P, Ho JC, Ciamponi FE, Ba-Alawi W, Coutinho FJ, Guilhamon P, Kushida MM, Cavalli FMG, Lee L, Rastegar N, Vu V, Sánchez-Osuna M, Coulombe-Huntington J, Kanshin E, Whetstone H, Durand M, Thibault P, Hart K, Mangos M, Veyhl J, Chen W, Tran N, Duong BC, Aman AM, Che X, Lan X, Whitley O, Zaslaver O, Barsyte-Lovejoy D, Richards LM, Restall I, Caudy A, Röst HL, Bonday ZQ, Bernstein M, Das S, Cusimano MD, Spears J, Bader GD, Pugh TJ, Tyers M, Lupien M, Haibe-Kains B, Artee Luchman H, Weiss S, Massirer KB, Prinos P, Arrowsmith CH, Dirks PB
Nat Commun 2021-02-12 ;12( 1 ):979.


Publications — IRIC January 7, 2021

UM171 Preserves Epigenetic Marks that Are Reduced in Ex Vivo Culture of Human HSCs via Potentiation of the CLR3-KBTBD4 Complex.

Chagraoui J, Girard S, Spinella JF, Simon L, Bonneil E, Mayotte N, MacRae T, Coulombe-Huntington J, Bertomeu T, Moison C, Tomellini E, Thibault P, Tyers M, Marinier A, Sauvageau G
Cell Stem Cell 2021-01-07 ;28( 1 ):48-62.e6.


Publications — IRIC January 1, 2021

The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions.

Oughtred R, Rust J, Chang C, Breitkreutz BJ, Stark C, Willems A, Boucher L, Leung G, Kolas N, Zhang F, Dolma S, Coulombe-Huntington J, Chatr-Aryamontri A, Dolinski K, Tyers M
Protein Sci 2021-01-01 ;30( 1 ):187-200.


Publications — IRIC November 19, 2020

ALDH2 Mediates 5-Nitrofuran Activity in Multiple Species.

Zhou L, Ishizaki H, Spitzer M, Taylor KL, Temperley ND, Johnson SL, Brear P, Gautier P, Zeng Z, Mitchell A, Narayan V, McNeil EM, Melton DW, Smith TK, Tyers M, Westwood NJ, Patton EE
Cell Chem Biol 2020-11-19 ;27( 11 ):1452.


Publications — IRIC November 6, 2020

Viral protein engagement of GBF1 induces host cell vulnerability through synthetic lethality.

Navare AT, Mast FD, Olivier JP, Bertomeu T, Neal M, Carpp LN, Kaushansky A, Coulombe-Huntington J, Tyers M, Aitchison JD
bioRxiv 2020-11-06 ;.


Publications — IRIC October 5, 2020

Crippling life support for SARS-CoV-2 and other viruses through synthetic lethality.

Mast FD, Navare AT, van der Sloot AM, Coulombe-Huntington J, Rout MP, Baliga NS, Kaushansky A, Chait BT, Aderem A, Rice CM, Sali A, Tyers M, Aitchison JD
J. Cell Biol. 2020-10-05 ;219( 10 ):.


Publications — IRIC September 7, 2020

G1/S transcription factors assemble in increasing numbers of discrete clusters through G1 phase.

Black L, Tollis S, Fu G, Fiche JB, Dorsey S, Cheng J, Ghazal G, Notley S, Crevier B, Bigness J, Nollmann M, Tyers M, Royer CA
J. Cell Biol. 2020-09-07 ;219( 9 ):.


Publications — IRIC September 3, 2020

Genome-Wide Screens Reveal that Resveratrol Induces Replicative Stress in Human Cells.

Benslimane Y, Bertomeu T, Coulombe-Huntington J, McQuaid M, Sánchez-Osuna M, Papadopoli D, Avizonis D, Russo MST, Huard C, Topisirovic I, Wurtele H, Tyers M, Harrington L
Mol Cell 2020-09-03 ;79( 5 ):846-856.e8.


Publications — IRIC June 11, 2020

Metabolic Regulation of the Epigenome Drives Lethal Infantile Ependymoma.

Michealraj KA, Kumar SA, Kim LJY, Cavalli FMG, Przelicki D, Wojcik JB, Delaidelli A, Bajic A, Saulnier O, MacLeod G, Vellanki RN, Vladoiu MC, Guilhamon P, Ong W, Lee JJY, Jiang Y, Holgado BL, Rasnitsyn A, Malik AA, Tsai R, Richman CM, Juraschka K, Haapasalo J, Wang EY, De Antonellis P, Suzuki H, Farooq H, Balin P, Kharas K, Van Ommeren R, Sirbu O, Rastan A, Krumholtz SL, Ly M, Ahmadi M, Deblois G, Srikanthan D, Luu B, Loukides J, Wu X, Garzia L, Ramaswamy V, Kanshin E, Sánchez-Osuna M, El-Hamamy I, Coutinho FJ, Prinos P, Singh S, Donovan LK, Daniels C, Schramek D, Tyers M, Weiss S, Stein LD, Lupien M, Wouters BG, Garcia BA, Arrowsmith CH, Sorensen PH, Angers S, Jabado N, Dirks PB, Mack SC, Agnihotri S, Rich JN, Taylor MD
Cell 2020-06-11 ;181( 6 ):1329-1345.e24.


Publications — IRIC May 14, 2020

Pharmacological inhibition of PRMT7 links arginine monomethylation to the cellular stress response.

Szewczyk MM, Ishikawa Y, Organ S, Sakai N, Li F, Halabelian L, Ackloo S, Couzens AL, Eram M, Dilworth D, Fukushi H, Harding R, Dela Seña CC, Sugo T, Hayashi K, McLeod D, Zepeda C, Aman A, Sánchez-Osuna M, Bonneil E, Takagi S, Al-Awar R, Tyers M, Richard S, Takizawa M, Gingras AC, Arrowsmith CH, Vedadi M, Brown PJ, Nara H, Barsyte-Lovejoy D
Nat Commun 2020-05-14 ;11( 1 ):2396.


Publications — IRIC April 15, 2020

Imipridone Anticancer Compounds Ectopically Activate the ClpP Protease and Represent a New Scaffold for Antibiotic Development.

Jacques S, van der Sloot AM, C Huard C, Coulombe-Huntington J, Tsao S, Tollis S, Bertomeu T, Culp EJ, Pallant D, Cook MA, Bonneil E, Thibault P, Wright GD, Tyers M
Genetics 2020-04-15 ;214( 4 ):1103-1120.


Publications — IRIC December 23, 2019

Robust cullin-RING ligase function is established by a multiplicity of poly-ubiquitylation pathways.

Hill S, Reichermeier K, Scott DC, Samentar L, Coulombe-Huntington J, Izzi L, Tang X, Ibarra R, Bertomeu T, Moradian A, Sweredoski MJ, Caberoy N, Schulman BA, Sicheri F, Tyers M, Kleiger G
Elife 2019-12-23 ;8:.


Publications — IRIC August 1, 2019

Gene Information eXtension (GIX): effortless retrieval of gene product information on any website.

Knight JDR, Samavarchi-Tehrani P, Tyers M, Gingras AC
Nat. Methods 2019-08-01 ;16( 8 ):665-666.


Publications — IRIC July 8, 2019

Mubritinib Targets the Electron Transport Chain Complex I and Reveals the Landscape of OXPHOS Dependency in Acute Myeloid Leukemia.

Baccelli I, Gareau Y, Lehnertz B, Gingras S, Spinella JF, Corneau S, Mayotte N, Girard S, Frechette M, Blouin-Chagnon V, Leveillé K, Boivin I, MacRae T, Krosl J, Thiollier C, Lavallée VP, Kanshin E, Bertomeu T, Coulombe-Huntington J, St-Denis C, Bordeleau ME, Boucher G, Roux PP, Lemieux S, Tyers M, Thibault P, Hébert J, Marinier A, Sauvageau G
Cancer Cell 2019-07-08 ;36( 1 ):84-99.e8.


Publications — IRIC April 1, 2019

Proteome-wide, Structure-Based Prediction of Protein-Protein Interactions/New Molecular Interactions Viewer.

Dong S, Lau V, Song R, Ierullo M, Esteban E, Wu Y, Sivieng T, Nahal H, Gaudinier A, Pasha A, Oughtred R, Dolinski K, Tyers M, Brady SM, Grene R, Usadel B, Provart NJ
Plant Physiol. 2019-04-01 ;179( 4 ):1893-1907.


Publications — IRIC March 28, 2019

The p38/HOG stress-activated protein kinase network couples growth to division in Candida albicans.

Sellam A, Chaillot J, Mallick J, Tebbji F, Richard Albert J, Cook MA, Tyers M
PLoS Genet. 2019-03-28 ;15( 3 ):e1008052.


Publications — IRIC March 1, 2019

Drug combinations: a strategy to extend the life of antibiotics in the 21st century.

Tyers M, Wright GD
Nat. Rev. Microbiol. 2019-03-01 ;17( 3 ):141-155.


Publications — IRIC January 8, 2019

The BioGRID interaction database: 2019 update.

Oughtred R, Stark C, Breitkreutz BJ, Rust J, Boucher L, Chang C, Kolas N, O'Donnell L, Leung G, McAdam R, Zhang F, Dolma S, Willems A, Coulombe-Huntington J, Chatr-Aryamontri A, Dolinski K, Tyers M
Nucleic Acids Res. 2019-01-08 ;47( D1 ):D529-D541.


Publications — IRIC September 7, 2018

Combined Enrichment/Enzymatic Approach To Study Tightly Clustered Multisite Phosphorylation on Ser-Rich Domains.

Kanshin E, Pascariu M, Tyers M, D'Amours D, Thibault P
J. Proteome Res. 2018-09-07 ;17( 9 ):3050-3060.


Publications — IRIC August 10, 2018

Real-time tracking of complex ubiquitination cascades using a fluorescent confocal on-bead assay.

Koszela J, Pham NT, Evans D, Mann S, Perez-Pi I, Shave S, Ceccarelli DFJ, Sicheri F, Tyers M, Auer M
BMC Biol. 2018-08-10 ;16( 1 ):88.


Publications — IRIC June 27, 2018

Condensin ATPase motifs contribute differentially to the maintenance of chromosome morphology and genome stability.

Palou R, Dhanaraman T, Marrakchi R, Pascariu M, Tyers M, D'Amours D
PLoS Biol. 2018-06-27 ;16( 6 ):e2003980.


Publications — IRIC May 23, 2018

G1/S Transcription Factor Copy Number Is a Growth-Dependent Determinant of Cell Cycle Commitment in Yeast.

Dorsey S, Tollis S, Cheng J, Black L, Notley S, Tyers M, Royer CA
Cell Syst 2018-05-23 ;6( 5 ):539-554.e11.


Publications — IRIC May 17, 2018

At Long Last, a C-Terminal Bookend for the Ubiquitin Code.

Chatr-Aryamontri A, van der Sloot A, Tyers M
Mol. Cell 2018-05-17 ;70( 4 ):568-571.


Publications — IRIC February 15, 2018

Cdc48/VCP Promotes Chromosome Morphogenesis by Releasing Condensin from Self-Entrapment in Chromatin.

Thattikota Y, Tollis S, Palou R, Vinet J, Tyers M, D'Amours D
Mol. Cell 2018-02-15 ;69( 4 ):664-676.e5.


Publications — IRIC January 2, 2018

Multivalent Interactions with Fbw7 and Pin1 Facilitate Recognition of c-Jun by the SCFFbw7 Ubiquitin Ligase.

Csizmok V, Montecchio M, Lin H, Tyers M, Sunnerhagen M, Forman-Kay JD
Structure 2018-01-02 ;26( 1 ):28-39.e2.


Publications — IRIC January 1, 2018

A High-Resolution Genome-Wide CRISPR/Cas9 Viability Screen Reveals Structural Features and Contextual Diversity of the Human Cell-Essential Proteome.

Bertomeu T, Coulombe-Huntington J, Chatr-Aryamontri A, Bourdages KG, Coyaud E, Raught B, Xia Y, Tyers M
Mol. Cell. Biol. 2018-01-01 ;38( 1 ):.


Publications — IRIC November 1, 2017

WD40 repeat domain proteins: a novel target class?

Schapira M, Tyers M, Torrent M, Arrowsmith CH
Nat Rev Drug Discov 2017-11-01 ;16( 11 ):773-786.


Publications — IRIC October 17, 2017

Revealing the Determinants of Widespread Alternative Splicing Perturbation in Cancer.

Li Y, Sahni N, Pancsa R, McGrail DJ, Xu J, Hua X, Coulombe-Huntington J, Ryan M, Tychhon B, Sudhakar D, Hu L, Tyers M, Jiang X, Lin SY, Babu MM, Yi S
Cell Rep 2017-10-17 ;21( 3 ):798-812.


Publications — IRIC July 7, 2017

CLMSVault: A Software Suite for Protein Cross-Linking Mass-Spectrometry Data Analysis and Visualization.

Courcelles M, Coulombe-Huntington J, Cossette É, Gingras AC, Thibault P, Tyers M
J. Proteome Res. 2017-07-07 ;16( 7 ):2645-2652.


Publications — IRIC May 18, 2017

Synthetic Genomics: Rewriting the Genome Chromosome by Chromosome.

van der Sloot A, Tyers M
Mol. Cell 2017-05-18 ;66( 4 ):441-443.


Publications — IRIC May 1, 2017

Machine Learning of Global Phosphoproteomic Profiles Enables Discrimination of Direct versus Indirect Kinase Substrates.

Kanshin E, Giguère S, Jing C, Tyers M, Thibault P
Mol. Cell Proteomics 2017-05-01 ;16( 5 ):786-798.


Publications — IRIC January 10, 2017

The BioC-BioGRID corpus: full text articles annotated for curation of protein-protein and genetic interactions.

Islamaj Doğan R, Kim S, Chatr-Aryamontri A, Chang CS, Oughtred R, Rust J, Wilbur WJ, Comeau DC, Dolinski K, Tyers M
Database (Oxford) 2017-01-10 ;2017:.


Publications — IRIC January 4, 2017

The BioGRID interaction database: 2017 update.

Chatr-Aryamontri A, Oughtred R, Boucher L, Rust J, Chang C, Kolas NK, O'Donnell L, Oster S, Theesfeld C, Sellam A, Stark C, Breitkreutz BJ, Dolinski K, Tyers M
Nucleic Acids Res. 2017-01-04 ;45( D1 ):D369-D379.


Publications — IRIC January 3, 2017

An allosteric conduit facilitates dynamic multisite substrate recognition by the SCF(Cdc4) ubiquitin ligase.

Csizmok V, Orlicky S, Cheng J, Song J, Bah A, Delgoshaie N, Lin H, Mittag T, Sicheri F, Chan HS, Tyers M, Forman-Kay JD
Nat Commun 2017-01-03 ;8:13943.


Publications — IRIC November 22, 2016

Systematic chemical-genetic and chemical-chemical interaction datasets for prediction of compound synergism.

Wildenhain J, Spitzer M, Dolma S, Jarvik N, White R, Roy M, Griffiths E, Bellows DS, Wright GD, Tyers M
Sci Data 2016-11-22 ;3:160095.


Publications — IRIC November 17, 2016

Discovery of Ibomycin, a Complex Macrolactone that Exerts Antifungal Activity by Impeding Endocytic Trafficking and Membrane Function.

Robbins N, Spitzer M, Wang W, Waglechner N, Patel DJ, O'Brien JS, Ejim L, Ejim O, Tyers M, Wright GD
Cell Chem Biol 2016-11-17 ;23( 11 ):1383-1394.


Publications — IRIC October 21, 2016

Data Independent Acquisition analysis in ProHits 4.0.

Liu G, Knight JD, Zhang JP, Tsou CC, Wang J, Lambert JP, Larsen B, Tyers M, Raught B, Bandeira N, Nesvizhskii AI, Choi H, Gingras AC
J Proteomics 2016-10-21 ;149:64-68.


Publications — IRIC September 26, 2016

Predictive computational phenotyping and biomarker discovery using reference-free genome comparisons.

Drouin A, Giguère S, Déraspe M, Marchand M, Tyers M, Loo VG, Bourgault AM, Laviolette F, Corbeil J
BMC Genomics 2016-09-26 ;17( 1 ):754.


Publications — IRIC September 1, 2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.

Kim S, Islamaj Doğan R, Chatr-Aryamontri A, Chang CS, Oughtred R, Rust J, Batista-Navarro R, Carter J, Ananiadou S, Matos S, Santos A, Campos D, Oliveira JL, Singh O, Jonnagaddala J, Dai HJ, Su EC, Chang YC, Su YC, Chu CH, Chen CC, Hsu WL, Peng Y, Arighi C, Wu CH, Vijay-Shanker K, Aydın F, Hüsünbeyi ZM, Özgür A, Shin SY, Kwon D, Dolinski K, Tyers M, Wilbur WJ, Comeau DC
Database (Oxford) 2016-09-01 ;2016:baw121.


Publications — IRIC June 13, 2016

Inhibition of Dopamine Receptor D4 Impedes Autophagic Flux, Proliferation, and Survival of Glioblastoma Stem Cells.

Dolma S, Selvadurai HJ, Lan X, Lee L, Kushida M, Voisin V, Whetstone H, So M, Aviv T, Park N, Zhu X, Xu C, Head R, Rowland KJ, Bernstein M, Clarke ID, Bader G, Harrington L, Brumell JH, Tyers M, Dirks PB
Cancer Cell 2016-06-13 ;29( 6 ):859-73.


Publications — IRIC March 29, 2016

Inhibition of SCF ubiquitin ligases by engineered ubiquitin variants that target the Cul1 binding site on the Skp1-F-box interface.

Gorelik M, Orlicky S, Sartori MA, Tang X, Marcon E, Kurinov I, Greenblatt JF, Tyers M, Moffat J, Sicheri F, Sidhu SS
Proc. Natl. Acad. Sci. U.S.A. 2016-03-29 ;113( 13 ):3527-32.


Publications — IRIC January 1, 2016

BioGRID: A Resource for Studying Biological Interactions in Yeast.

Oughtred R, Chatr-Aryamontri A, Breitkreutz BJ, Chang CS, Rust JM, Theesfeld CL, Heinicke S, Breitkreutz A, Chen D, Hirschman J, Kolas N, Livstone MS, Nixon J, O'Donnell L, Ramage L, Winter A, Reguly T, Sellam A, Stark C, Boucher L, Dolinski K, Tyers M
Cold Spring Harb Protoc 2016-01-01 ;2016( 1 ):pdb.top080754.

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Michael Tyers
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  • Publications (225)
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